Open Source Software Tools

  • PubHarvester: An open-source software tool designed to retrieve scientific publications data from MEDLINE.
  • SC/Gen and Second Degree Report: Two open-source software tools to create the two-degree, egocentric coauthorship network for a set of "superstar" scientists.
  • Scientific Distance: An open-source software tool designed to calculate distance between any pair of scientists in "ideas space" based on the overlap of the MeSH keywords in their publications.
  • FindRelated: An open-source software tool designed to harvest efficiently the set of articles returned by the PubMed Related Citation alorithm, for any given set of pmids provided as an input.

Miscellaneous Stata Links: [Integrating Stata and External Text Editors] [Using TextPad with Stata]